Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015790640.1_cds_XP_016502871.1_1562
CDS Infomation

[gene=LOC107820992] [db_xref=GeneID:107820992] [protein=aspartate aminotransferase, chloroplastic-like] [protein_id=XP_016502871.1] [location=join(6295..6366,6461..6526,7656..7850,8199..8237,8326..8415,8523..8631,8704..8813,9521..9664,10071..10237,10483..10747,11020..11151)] [gbkey=CDS]
Sequence

ATGGTTTCCACAATGTTCTCTCTAGCTTCTGCCACTCCGTCAGCTTCATTTTCCTTGCAA
GATAATCTCAAGTCAAAGCTAAAGCTGGGGACTACTAGCCAAAGTGCCTTTTTCGGGAAA
GACTTCGTGAAGGCAAAGTCAAATGGCCGTACTACTATGACTGTTGCTGTGAACGTCTCT
CGATTTGAGGGAATAACTATGGCTCCTCCTGACCCCATTCTTGGAGTTTCTGAAGCATTC
AAGGCTGATACAAATGAACTGAAGCTTAACCTTGGTGTTGGAGCTTACCGCACGGAGGAG
CTTCAACCATATGTCCTCAATGTTGTTAAGAAAGCAGAAAACCTTATGCTAGAAAGAGGA
GATAACAAAGAGTATCTTCCAATAGAAGGTTTGGCTGCATTCAACAAAGTCACAGCAGAG
TTATTGTTTGGAGCAGATAACCCAGTGATTCAGCAACAAAGGGTGGCTACTATTCAAGGT
CTGTCAGGAACTGGGTCATTGCGTATTGCTGCAGCACTGATAGAGCGTTACTTCCCTGGC
TCTAAGGTTTTAATATCATCTCCAACCTGGGGAAATCATAAGAACATTTTCAATGATGCC
AGGGTGCCTTGGTCTGAATATCGATATTATGATCCCAAAACAGTTGGCCTGGATTTTGCT
GGGATGATAGAAGATATTAAGGCTGCTCCTGAAGGATCATTTATCTTGCTCCATGGCTGT
GCGCACAACCCAACTGGTATTGATCCCACAATTGAACAATGGGAAAAGATTGCTGATGTA
ATTCAGGAGAAGAACCACATTCCATTTTTTGATGTCGCCTACCAGGGATTTGCAAGCGGC
AGCCTTGACGAAGATGCCTCATCTGTGAGATTGTTTGCTGCACGTGGCATGGAGCTTTTG
GTTGCTCAATCATATAGTAAAAATCTGGGTCTGTATGGAGAAAGGATTGGAGCTATTAAT
GTTCTTTGCTCATCCGCTGATGCAGCGACAAGGGTGAAAAGCCAGCTAAAAAGGCTTGCT
CGACCAATGTACTCAAATCCCCCAATTCACGGTGCTAGAATTGTTGCCAATGTCGTTGGA
ATTCCTGAGTTCTTTGATGAATGGAAACAAGAGATGGAAATGATGGCAGGAAGGATAAAG
AGTGTGAGACAGAAGCTATACGATAGCCTCTCCACCAAGGATAAGAGTGGAAAGGACTGG
TCATACATTTTGAAGCAGATTGGAATGTTCTCCTTCACAGGCCTCAACAAAGCTCAGAGC
GAGAACATGACCAACAAGTGGCATGTGTACATGACAAAAGACGGGAGGATATCGTTGGCT
GGATTATCAGCTGCTAAATGCGAATATCTTGCAGATGCCATAATTGACTCGTACTACAAT
GTCAGCTAA

Peptide Sequence

PEP ID

XP_016502871.1
PEP Infomation

PREDICTED: aspartate aminotransferase, chloroplastic-like [Nicotiana tabacum]
Sequence

MVSTMFSLASATPSASFSLQDNLKSKLKLGTTSQSAFFGKDFVKAKSNGRTTMTVAVNVS
RFEGITMAPPDPILGVSEAFKADTNELKLNLGVGAYRTEELQPYVLNVVKKAENLMLERG
DNKEYLPIEGLAAFNKVTAELLFGADNPVIQQQRVATIQGLSGTGSLRIAAALIERYFPG
SKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFAGMIEDIKAAPEGSFILLHGC
AHNPTGIDPTIEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDEDASSVRLFAARGMELL
VAQSYSKNLGLYGERIGAINVLCSSADAATRVKSQLKRLARPMYSNPPIHGARIVANVVG
IPEFFDEWKQEMEMMAGRIKSVRQKLYDSLSTKDKSGKDWSYILKQIGMFSFTGLNKAQS
ENMTNKWHVYMTKDGRISLAGLSAAKCEYLADAIIDSYYNVS

Transcript Sequence

Gene sequence data has not been registered.